Type: Package
Package: BayesfMRI
Title: Spatial Bayesian Methods for Task Functional MRI Studies
Version: 0.11.0
Authors@R: c(
    person(given = "Amanda",
           family = "Mejia",
           email = "mandy.mejia@gmail.com",
           role = c("aut", "cre")),
    person(given = "Damon",
           family = "Pham",
           email = "damondpham@gmail.com",
           role = c("ctb"),
           comment = c(ORCID = "0000-0001-7563-4727")),
    person(given = "David",
           family = "Bolin",
           email = "david.bolin@kaust.edu.sa",
           role = c("ctb")),
    person(given = "Yu (Ryan)",
           family = "Yue",
           email = "yybaruch@gmail.com",
           role = c("ctb")),
    person(given = "Daniel",
           family = "Spencer",
           email = "danieladamspencer@gmail.com",
           role = c("aut"),
           comment = c(ORCID = "0000-0002-9705-3605")),
    person(given = "Sarah",
           family = "Ryan",
           email = "sarahryan320@gmail.com",
           role = c("ctb"))
           )
Maintainer: Amanda Mejia <mandy.mejia@gmail.com>
Description: Performs a spatial Bayesian general linear model (GLM) for
        task functional magnetic resonance imaging (fMRI) data on the
        cortical surface. Additional models include group analysis and
        inference to detect thresholded areas of activation. Includes
        direct support for the 'CIFTI' neuroimaging file format. For
        more information see A. F. Mejia, Y. R. Yue, D. Bolin, F.
        Lindgren, M. A. Lindquist (2020)
        <doi:10.1080/01621459.2019.1611582> and D. Spencer, Y. R. Yue,
        D. Bolin, S. Ryan, A. F. Mejia (2022)
        <doi:10.1016/j.neuroimage.2022.118908>.
License: GPL-3
URL: https://github.com/mandymejia/BayesfMRI
BugReports: https://github.com/mandymejia/BayesfMRI/issues
Additional_repositories: https://inla.r-inla-download.org/R/testing
Depends: R (>= 3.6.0)
Imports: car, ciftiTools (>= 0.17.2), excursions, foreach, fMRItools
        (>= 0.5.3), MASS, Matrix, matrixStats, methods, Rcpp, stats,
        sp, utils, viridisLite
Suggests: covr, abind, grDevices, hrf, INLA (>= 0.0-1468840039), knitr,
        MatrixModels, parallel, purrr, rmarkdown, SQUAREM, testthat (>=
        3.0.0), spelling
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
LinkingTo: RcppEigen, Rcpp
Language: en-US
Config/pak/sysreqs: libabsl-dev cmake libfreetype6-dev libgdal-dev
        gdal-bin libgeos-dev libglu1-mesa-dev make libgsl0-dev texlive
        libicu-dev libpng-dev libuv1-dev libxml2-dev libgl1-mesa-dev
        libssl-dev libproj-dev libsqlite3-dev libudunits2-dev
        zlib1g-dev
Repository: https://mandymejia.r-universe.dev
Date/Publication: 2025-12-30 02:06:12 UTC
RemoteUrl: https://github.com/mandymejia/bayesfmri
RemoteRef: HEAD
RemoteSha: 78df019b92af36bd227615dbcf4b5aa7da869ac3
NeedsCompilation: yes
Packaged: 2026-06-22 10:24:32 UTC; root
Author: Amanda Mejia [aut, cre],
  Damon Pham [ctb] (ORCID: <https://orcid.org/0000-0001-7563-4727>),
  David Bolin [ctb],
  Yu (Ryan) Yue [ctb],
  Daniel Spencer [aut] (ORCID: <https://orcid.org/0000-0002-9705-3605>),
  Sarah Ryan [ctb]